Vela V, Juskevicius D, Prince SS, Cathomas G, Dertinger S, Diebold J, Bubendorf L, Horcic M, Singer G, Zettl A, Dirnhofer S, Tzankov A, Menter T.
Deciphering the genetic landscape of pulmonary lymphomas.
Mod Pathol. 2020 Aug 27. doi: 10.1038/s41379-020-00660-2. Online ahead of print.


Egli-Gany D, Spaar Zographos A, Diebold J, Masserey Spicher V, Frey Tirri B, Heusser R, Dillner J, Petignat P, Sahli R on behalf of the CIN3+ plus study group (Noppen C et al.).
Human papillomavirus genotype distribution and socio-behavioural characteristics in women with cervical pre-cancer and cancer at the start of a human papillomavirus vaccination programme: the CIN3+ plus study.
BMC Cancer. 2019;19:111.

Valensi M, Goldman G, Marchant D, Van Den Berghe L, Jonet L, Daruich A, et al.
Sostdc1 is expressed in all major compartments of developing and adult mammalian eyes. 
Graefes Arch Clin Exp Ophthalmol. 2019 Sep 16. doi: 10.1007/00417-019-04462-4.

Kempf W, Torricelli R, Zettl A, Zimmermann AK, Berisha A, Ghielmini M.
Primary Cutaneous Anaplastic Lymphoma Kinase-Positive Large B-Cell Lymphoma.
Am J Dermatopathol. 2019 Aug;41(8):602-605.

Egli A, Saalfrank C, Goldman N, Brunner M, Hollenstein Y, Vogel T, Augustin N, Wüthrich D, Seth-Smith HMB, Roth E, Syedbasha M, Mueller NF, Vogt D, Bauer J, Amar-Sliwa N, Meinel DM, Dubuis O, Naegele M, Tschudin-Sutter S, Buser A, Nickel CH, Zeller A, Ritz N, Battegay M, Stadler T, Schneider-Sliwa R.
Identification of influenza urban transmission patterns by geographical, epidemiological and whole genome sequencing data: protocol for an observational study.
BMJ Open. 2019 Aug 20.

Savic S, Berezowska S, Eppenberger-Castori S, Cathomas G, Diebold J, Fleischmann A, Jochum W, Komminoth P, McKee T, Letovanec I, Jasarevic Z, Rössle M, Singer G, von Gunten M, Zettl A, Zweifel R, Soltermann A, Bubendorf L.
PD-L1 testing of non-small cell lung cancer using different antibodies and platforms: a Swiss cross-validation study.
Virchows Arch. 2019 Jul;475(1):67-76.

Benton SC, Tetteh GK, Needham S, Mücke J, Sheppard L, Alderson S, Ruppen C, Curti M, Redondo M, Milan AM.
Evaluation of the 25-hydroxy vitamin D assay on a fully automated liquid chromatography mass spectrometry system, the Thermo Scientific Cascadion SM Clinical Analyzer with the Cascadion 25-hydroxy vitamin D assay in a routine clinical laboratory.
Clin Chem Lab Med. 2019; 0834.

Seth-Smith HMB, Casanova C, Sommerstein R, Meinel DM, Abdelbary MMH, Blanc DS, Droz S, Führer U, Lienhard R, Lang C, Dubuis O, Schlegel M, Widmer A, Keller PM, Marschall J, Egli A.
Phenotypic and Genomic Analyses of Burkholderia stabilis Clinical Contamination, Switzerland.
Emerg Infect Dis. 2019 Jun;25(6).

Wüthrich D, Gautsch, Spieler-Denz R, Dubuis O, Gaia V, Moran-Gilad J, Hinz V, Seth-Smith H, Nickel C, Tschudin-Sutter S, Bassetti S, Haenggi M, Brodmann P, Fuchs S, Egil A.
Air-conditioner cooling towers as complex reservoirs and continuous source of Legionella pneumophila infection evidenced by a genomic analysis study in 2017, Switzerland.
Euro Surveill. 2019;24(4):pii:1800192.

Panarello D, Compérat E, Seyde O, Colau A, Terrone C, Guillonneau B.
Atlas of Ex Vivo Prostate Tissue and Cancer Images Using Confocal Laser Endomicroscopy: A Project for Intraoperative Positive Surgical Margin Detection During Radical Prostatectomy.
Eur Urol Focus. 2019 Jan 23. pii: S2405-4569(19)30004-5. doi: 10.1016/j.euf.2019.01.004.

Lheure C, Hoffmann C, Kramkimel N, Plée J, Franck N, Vanhaecke C, Goldman-Lévy G, Bataillon G, Damotte D, Dupin N, Aractingi S, Grange F, Guégan S.
Unresectable Non-metastatic Primary Melanoma: Complete Remission Following Treatment with Anti-Programmed-cell-death-receptor 1.
Acta Derm Venereol. 2019 Jan 1;99(1):107-108.

Wüthrich D, Gautsch S, Spieler-Denz R, Dubuis O, Gaia V, Moran-Gilad J, Hinic V, Seth-Smith HM, Nickel CH, Tschudin-Sutter S, Bassetti S, Haenggi M, Brodmann P, Fuchs S, Egli A.
Air-conditioner cooling towers as complex reservoirs and continuous source of Legionella pneumophila infection evidenced by a genomic analysis study in 2017, Switzerland.
Euro Surveill. 2019 Jan;24(4).


Pillonel V, Juskevicius D, Ng CKY, Bodmer A, Zettl A, Jucker D, Dirnhofer S, Tzankov A.
High-throughput sequencing of nodal marginal zone lymphomas identifies recurrent BRAF mutations.
Leukemia. 2018 Nov;32(11):2412-242.
Heim D, Kronenberg A, Overesch G, Plüss-Suard C, Schüpbach G, Bless P, Bürgmann H, Dubuis O, Egli A, Frei R et al.
Usage of Antibiotics and Occurrence of Antibiotic Resistance in Bacteria from Humans and Animals in Switzerland.
Swiss Antibiotic Resistance Report. 2018;2018-OEG-87.
Seth-Smith H, Reist J, Agnetti J, Gautsch S, Wüthrich D, Dubuis O, Naegele M, Steffen I, Fuchs S, Brodmann P, Egli A.
Campylobacter: high resolution phylogenetic surveillance study of a foodborne pathogen over two years in Basel, Switzerland, using Whole Genome Sequencing (WGS).
Poster 2018; ECCMID Kongress Madrid.
Ankli B, Khanlari B, Pegios V, Zettl A, Daikeler T.
Whipple's disease mimicking an auto-inflammatory disease with myositis and soft tissue inflammation.
Joint Bone Spine. 2018 Oct;85(5):645-646.

Grespan E, Giobbe GG, Badique F, Anselme K, Rühe J, Elvassore N.
Effect of geometrical constraints on human pluripotent stem cell nuclei in pluripotency and differentiation.
Integr Biol (Camb). 2018 May 21.

Zanchin C, Yamaji K, Rogge C, Lesche D, Zanchin T, Ueki Y, Windecker S, Mohacsi P, Räber L, Sigurdardottir V.
Progression of cardiac allograft vasculopathy assessed by serial three-vessel quantitative coronary angiography.
PLoS ONE, 2018, 13(8): e0202950.


Erne P, Müller A, Rossi GP, Seifert B, Stehlin F, Redondo M, Bauer PT, Kobza R, Resink TJ, Radovanovic R.
Aldosterone and renin in cardiac patients referred to catherization.
Medicine 2017; 96: 25(e7282).
Ottiger C, Naegele M, Meinel D, Keller M, Mitrovic S, Rentsch K, Oberle M, Noppen Ch, Sutter R Ch, Tschudin Sutter S, Hinic V, Dubuis O, Burki D, Egli A.
A multi-centre prospective evaluation of the new Filmarray meningitis/encephalitis panel for rapid PCR-based diagnostics.
Poster 2017; ECCMID Kongress Wien.
Gerding H, Zettl A, Timmermann M.
Bothersome Cutaneous Lesion for more than 30 Years: Dilated Pore of Winer.
Klin Monbl Augenheilkd. 2017 Apr;234(4):595-596.
Seth-Smith H, Meinel D, Blanc D S, Abdelbary M, Droz S, Fuehrer U, Casanova C L, Lang C, Dubuis O, Schlegel M, Sommerstein R, Widmer A F, Keller1 P, Marschall J, Egli A.
Burkholderia stabilis outbreak associated with contaminated wash gloves: description and genome sequence of an opportunistic pathogen.
Poster 2017; ECCMID Kongress Wien.
Joosse-Konrad N, Hinic V, Lang C, Dubuis O, Burki D, Egli A.
Comparison of four different phenotypic assays to determine colis5ne suscep5bility in Enterobacteriaceae and non-fermen5ng bacteria.
Poster, 2017; SGM Basel.
Bihl MP, Tornillo L, Kind AB, Obermann E, Noppen C, Chaffard R, Wynne P, Grilli B, Foerster A, Terracciano LM, Hoeller S.
Human Papillomavirus (HPV) Detection in Cytologic Specimens: Similarities and Differences of Available Methodology.
Appl Immunohistochem Mol Morphol. 2017;25:184-189.
Wang B, Harms D, Hofmann J, Ciardo D, Keubhl A, Bock C-T.
Identification of a Novel Hepatitis E Virus Genotype 3 Strain Isolated from a Chronic Hepatitis E Virus Infection in a Kidney Transplant Recipient in Switzerland.
Genome Announc. 2017; 5(20): e00345-17.
Tampakis A, Tampaki EC, Posabella A, Zettl A, Kouraklis G, von Flüe M, Guenin MO.
KRAS Mutations With No GNAS Mutations in an Intraductal Papillary Mucinous Neoplasm: Are There Common Pathways With Pancreatic Ductal Adenocarcinoma? Lessons From an Extended IPMN, Covering the Entire Pancreas.
Pancreas. 2017 Jan;46(1):e5-e7.
Parlar B, Zettl A, Gerding H.
Listeria Monocytogenes Endophthalmitis after Intermediate Uveitis and ppV for Retinal Detachment.
Klin Monbl Augenheilkd. 2017 Apr;234(4):564-566.
Weixler B, Rickenbacher A, Raptis DA, Viehl CT, Guller U, Rueff J, Zettl A, Zuber M.
Sentinel Lymph Node Mapping with Isosulfan Blue or Indocyanine Green in Colon Cancer Shows Comparable Results and Identifies Patients with Decreased Survival: A Prospective Single-Center Trial.
World J Surg. 2017 Sep;41(9):2378-2386.

Lesche D, Sigurdardottir V, Leichtle AB, Nakas CT, Christians U, Englberger L, Fiedler M, Largiadèr CR, Mohacsi P, Sistonen J.
Targeted and global pharmacometabolomics in everolimusbased immunosuppression: association of co-medication and lysophosphatidylcholines with dose requirement.
Metabolomics (2018) 14:3. First online: 25. November 2017.



Derungs A, Donzelli M, Berger B, Noppen C, Krähenbühl S, Haschke M.
Effects of Cytochrome P450 Inhibition and Induction on the Phenotyping Metrics of the Basel Cocktail: A Randomized Crossover Study.
Clin Pharmacokinet. 2016;55:79-91.
Weixler B, Warschkow R, Güller U, Zettl A, von Holzen U, Schmied BM, Zuber M.
Isolated tumor cells in stage I & II colon cancer patients are associated with significantly worse disease-free and overall survival.
BMC Cancer. 2016;16:106.
Irlé C, Weintraub J.
Long-Term Treatment with Romidepsin in Patients with Peripheral T-Cell Lymphoma.
Case Rep Hematol 2016 ; 2016 :8175957 3 pages.
Koechlin L, Zettl A, Koeberle D, von Flüe M, Bolli M.
Metastatic Inflammatory Myofibroblastic Tumor of the Spleen: A Case Report and Review of the Literature.
Case Rep Surg. 2016;2016:8593242. 
Wirz SA, Blum CA, Schuetz P, Albrich WC, Noppen C, Mueller B, Christ-Crain M, Tarr PE;  for the STEP Study Group.
Pathogen- and antibiotic-specific effects of prednisone in community-acquired pneumonia.
Eur Respir J. 2016;48:1150-1159. 
Fabian D, Baumgartner M R, Koller M F.
Sinn und Unsinn von Haaranalysen.
Swiss Medical Forum 2016; 16(22):466-471.
Zumstein V, Vinzens F, Zettl A, Heinimann K, Koeberle D, von Flüe M, Bolli M.
Systematic immunohistochemical screening for Lynch syndrome in colorectal cancer: a single centre experience of 486 patients.
Swiss Med Wkly. 2016;146:w14315
Zumstein V, Vinzens F, Zettl A, Heinimann K, Koeberle D, von Flüe M, Bolli M.
Systematic screening for Lynch syndrome in colorectal cancer.
(Summary) Swiss Med Wkly. 2016;146:w14315
Tampakis A, Zettl A, Tampaki EC, Posabella A, von Flüe M, Guenin MO.
Two Large Benign Branch-Duct Gastric-Type Ιntraductal Papillary Mucinous Neoplasms of the Pancreas With Positive GNAS Mutations A Question of When or Using Which Technique to Operate?
Pancreas. 2016;45(5):e16-7



Fabian D, Koller M, Miedinger D.
Biomonitoring zur Beurteilung der beruflichen Metall-Exposition.
Suva Medical. 2015; 146-156.
Laurent-Puig P, Costa JL, Sheils O, Tops BB, Mafficini A, Le Corre D, Kurth H, Noppen C, Ligtenberg M, Scarpa A, Normanno N, Nishio K, Vaughn C.
Comprehensive genetic profiling of chromosomal translocations in lung cancer tumors: development and validation of a next-generation sequencing panel in an international multicenter study.
Cancer Research. 2015;75(15 Supplement):4891-4891. DOI:10.1158/1538-7445.AM2015-4891
Schüpbach J, Niederhauser C, Yerly S, Regenass S, Gorgievski M, Aubert V, Ciardo D, Klimkait T, Dollenmaier G, Andreutti C, Martinetti G, Brandenberger M, Gebhardt MD.
Decreasing Proportion of Recent Infections among Newly Diagnosed HIV-1 Cases in Switzerland, 2008 to 2013 Based on Line-Immunoassay-Based Algorithms.
PLoS One. 2015;10(7):e0131828
Tops BB, Normanno N, Kurth H, Amato E, Mafficini A, Rieber N, Le Corre D, Rachiglio AM, Reiman A, Sheils O, Noppen C, Lacroix L, Cree IA, Scarpa A, Ligtenberg MJ, Laurent-Puig P.
Development of a semi-conductor sequencing-based panel for genotyping of colon and lung cancer by the Onconetwork consortium.
BMC Cancer. 2015;15:26. doi: 10.1186/s12885-015-1015-5.
Bihl MP, Tornillo L, Kind AB, Obermann E, Noppen C, Chaffard R, Wynne P, Grilli B, Foerster A, Terracciano LM, Hoeller S.
Human Papillomavirus (HPV) Detection in Cytologic Specimens: Similarities and Differences of Available Methodology.
Appl Immunohistochem Mol Morphol. 2015.
Weixler B, Warschkow R, Zettl A, Riehle H-M, Guller U, Viehl C T, Zuber M.
Intranodal Mapping Using Carbon Dye Results in More Accurate Lymph Node Staging in Colon Cancer Patients.
World J Surg. 2015;DOI 10.1007/s00268-015-3130-5.
Itin P, Bosshard PP, Toutous Trellu L, Schmidt AJ, Vernazza P, Tarr P, Stoeckle M, Wymann M, Ciardo D, Walser S, Claass J, Scheidegger C, Low N, Oertle-Meyer D, Cavassini M, Schmid P, Bernasconi E, Haerry D, Boffi el Amari E, Herold M, Klimkait T, Kahlert C, Furrer H, Lautenschlager S, Calmy A, Fehr A.
Syphilis: Diagnostik und Behandlung.
SMF 2015;15:459-465.



Fabian D.
25 Years of Monitoring Occupational Exposure to Metals in Switzerland: Results, Achievements and Future Challenges.
Genf, 2014.
Enko D, Fridrich L, Rezanka E, Stolba R, Ernst J, Wendler I, Fabian D, Hauptlorenz S, Halwachs-Baumann G.
25-hydroxy-Vitamin D status: limitations in comparison and clinical interpretation of serum-levels across different assay methods.
Clin Lab. 2014;60(9):1541-50.
Noto T, Kurth HM, Mochizuki K.
Analysis of Piwi-loaded small RNAs in Tetrahymena.
Methods Mol Biol. 2014;1093:209-24.
Lehmann FS, Trapani F, Fueglistaler I, Terracciano LM, von Flüe M, Cathomas G, Zettl A, Benkert P, Oertli D, Beglinger C.
Clinical and histopathological correlations of fecal calprotectin release in colorectal carcinoma.
World J Gastroenterol. 2014 May 7;20(17):4994-9. doi: 10.3748/wjg.v20.i17.4994.
Derungs A, Donzelli M, Berger B, Noppen C, Krähenbühl S, Haschke M.
Effects of Cytochrome P450 Inhibition and Induction on the Phenotyping Metrics of the Basel Cocktail: A Randomized Crossover Study. 
Clin Pharmacokinet DOI 10.1007/s40262-015-0294-y.
Vollmer K, Regeniter A.
Evaluation of a new method to measure glycated hemoglobin by capillary electrophoresis.
Poster, SGKC-Kongress, 2014.
Weixler B, von Holzen U, Güller U, Warschkow R, Schmied B, Viehl C, Zettl A, Zuber M.
Isolated Tumor Cells are a Negative Prognostic Factor for Disease-free and Overall Survival in Stage I & II Colon Cancer Patients: A Propensity Score Analysis.
Colorectal Cancer Research Scholar Award, Society of Surgical Oncology (SSO) 2014.
Croner RS, Geppert CI, Bader FG, Nitsche U, Späth C, Rosenberg R, Zettl A, Matias-Guiu X, Tarragona J, Güller U, Stürzl M, Zuber M.
Molecular staging of lymph node-negative colon carcinomas by one-step nucleic acid amplification (OSNA) results in upstaging of a quarter of patients in a prospective, European, multicentre study.
Br J Cancer. 2014 May 13;110(10):2544-50. doi: 10.1038/bjc.2014.170. Epub 2014 Apr 10.
Schleiffenbaum B.
Myelodysplasie - eine häufige hämatologische Neoplasie im Alter.
Praxis 2014;103(11):617-627.
Kempf W, Kazakov DV, Buechner SA, Graf M, Zettl A, Zimmermann DR, Tinguely M.
Primary cutaneous marginal zone lymphoma in children: a report of 3 cases and review of the literature.
Am J Dermatopathol. 2014 Aug;36(8):661-6. doi: 10.1097/DAD.0000000000000062.
Sidler J, Käch R, Noppen C, Dangel M, Battegay M, Bingisser R, Dubuis O, Widmer A.
Rectal swab for detection of norovirus by real-time PCR: similar sensitivity compared to faecal specimens.
Clinical Microbiology and Infection 2014;CLM-14-7136.
Donzelli M, Derungs A, Serratore M-G, Noppen C, Nezic L, Krähenbühl S, Haschke M.
The Basel Cocktail for Simultaneous Phenotyping of Human Cytochrome P450 Isoforms in Plasma, Saliva and Dried Blood Spots.
Clin Pharmacokinet 2014;53:271-82;DOI 10.1007/s40262-013-0115-0.
Magdaleno SM, Cheng A, Petraroli R, Sheils O, Tops B, Le Corre D, Kurth H, Blons H, Amato E, Mafficini A, Rachiglio AM, Reimann A, Noppen C, Ainali C, Katayama J, Franco R, Feilotter H, Park PC, Schageman J, Cree I, Felton A, Costa JL, Rico A, Scarpa A, Machado JC, Nishio K, Normanno N, Ligtenberg M, Vaughn CP, Lacroix L, Laurent-Puig P. 
The OncoNetwork Consortium: A global collaborative research study on the development and verification of an Ion AmpliSeq™ RNA Lung Fusion Panel. 
Poster, American Association for Cancer Research (AACR) Meeting, 2014.
Ströbel P, Zettl A, Shilo K, Chuang WY, Nicholson AG, Matsuno Y, Gal A, Laeng RH, Engel P, Capella C, Marino M, Chan JK, Rosenwald A, Travis W, Franks TJ, Ellenberger D, Schaefer IM, Marx A.
Tumor genetics and survival of thymic neuroendocrine neoplasms: a multi-institutional clinicopathologic study.
Genes Chromosomes Cancer. 2014 Sep;53(9):738-49. doi: 10.1002/gcc.22183. Epub 2014.
Oberson A.
Vegetarische Ernährung im Fechtsport.
Liestal 2014.
Cienfuegos J, Bramlett K, Magdaleno SM, Cheng A, Petraroli R, Budagyan M, Hyland F, Gottimukkala R, Sheils O, Tops B, Le Corre D, Kurth H, Blons H, Amato E, Mafficini A, Rachiglio AM, Reimann A, Noppen C, Ainali C, Katayama J, Franco R, Feilotter H, Park PC, Schageman J, Cree I, Costa JL, Rico A, Scarpa A, Machado JC, Nishio K, Normanno N, Ligtenberg M, Vaughn CP, Lacroix L, Laurent-Puig P. 
Verification of an Ion AmpliSeq™ RNA Fusion Lung Cancer Research Panel, workflow, and analysis solution: an OncoNetwork collaborative research study. 
Poster, The American Society of Human Genetics (ASHG) Meeting, 2014.



Dilger K, Lopez-Lazaro L, Marx C, Bussmann C, Straumann A.
Active eosinophilic esophagitis is associated with impaitres elimination of budesonide by cytochrome =450 3A enzymes.
Digestion 2013;87:110-7.
Kurth H, Amato E, Le Corre D, Rachiglio AM, Tops B, Mafficini A, Reiman A, Sheils O, Noppen C, Cree I, Ligtenberg M, Normanno N, Scarpa A, Laurent-Puig P, Lacroix L.
A European OncoNetwork Consortium study to develop Ion AmpliSeq™ Colon and Lung Cancer Panel to detect most frequent somatic CRC or NSCLC mutations on FFPE samples.
Poster, European Society of Human Genetics (ESHG) Meeting 2013.
Straumann A, Hoesli S, Bussmann C, Stuck M, Perkins M, Collins LP, Payton M, Pettipher R, Hunter M, Steiner J, Simon HU.
Anti-eosinophil activity and clinical efficacy of the CRTH2 antagonist OC000459 in eosinophilic esophagitis.
Allergy 2013;68:375-85.
Kurth H, Ankelin A, Caldarone A, Zettelmayer AK, Bürgin J, Reichenbach P, Zettl A, Noppen C.
Cancer Biomarker Detection using Next Generation Sequencing in a Routine Clinical Setting.
Poster, Miptec Basel 2013.
Loubeyre P, Bodmer A, Tille JC, Egger JF, Diebold-Berger S, Copercini M, Rozenholc A, Petignat P, Castiglione M.
Concordance between core needle biopsy and surgical excision specimens for tumor hormone receptor profiling according to the 2011 St. Gallen Classification, in clinical practice.
Breast J. 2013 Nov-Dec;19(6):605-10.
Schoepfer AM, Safroneeva E, Bussmnann C, Kuchen T, Portmann S, Simon HU, Straumann A.
Delay in diagnosis of eosinophilic esophagitis increases risk for stricture in a time-dependent manner.
Gastroenterology 2013;145:1230-6.
Bussmann C, Straumann A.
Eosinophile Ösophagitis: Der diagnostische Beitrag der Pathologie.
Pathologe 2013;34:110-7 DOI 10.1007/s00292-012-1721-6.
Tomova L, Kufner K, Geyer R, Svoboda M, Curti M, Longoni S, Burki D, Viollier EH.
LC-MS/MS analysis of plasma 25-hydroxy-Vitamin D: Comparison of two extraction methods.
Poster, Eurolab Milano 2013.
Mochizuki K, Kurth H.
Loading and pre-loading processes generate a distinct siRNA population in Tetrahymena.
Biochem Biophys Res Commun. 2013 Jul 5;436(3):497-502.
Derrouis S, Egger J-F, Yves Wespi Y, Kinkel K.
Masse pelvienne chez une femme à 21 semaines d'aménorrhée Pelvi-abdominal mass seen during pregnancy.
Imagerie de la Femme 2013;04.006.
Schaub-Krassai N.
Methodenevaluation zur quantitativen Messung der Vitamine B1 und B6 im Vollblut mittels HPLC.
Allschwil 2013.
Normanno N, Petraroli R, Rico A, Kurth H, Tops B, Amato E, Mafficini A, Le Corre D, Rachiglio AM, Reiman A, Sheils O, Noppen C, Rieber N, Mangion J, Ainali C, Lacroix L, Cree I, Ligtenberg M, Felton A, Scarpa A, Laurent-Puig P.
OncoNetwork Consortium: an European Collaborative Research study on the development of a Colon and Lung cancer genes hot spot panel with Ion AmpliSeq™ Technology on the Ion PGM™ Sequencer.
Poster, American Association for Cancer Research (AACR) Meeting 2013.
Fenzl M, Schnizer W, Aebli N, Schlegel C, Villiger B, Disch A, Gredig J, Zaugg T, Krebs J, Viollier AG.
Release of ANP and fat oxidation in overweight persons during aerobic exercise in water.
Int J Sports Med 2013 Feb 27;(Epub ahead of print) DOI: 10.1055/s-0033-1333696.
Donzelli M, Derungs A, Serratore M-G, Noppen C, Nezic L, Krähenbühl, Haschke M.
The Basel Cocktail for Simultaneous Phenotyping of Human Cytochrome P450 Isoforms in Plasma, Saliva and Dried Blood Spots.
Clin Pharmacokinet 2013;DOI 10.1007/s40262-013-0115-0.



Kufner K, Roth HJ, Tomova L, Togni G, Curti M, Longoni S, Burki D, Viollier EH.
25-hydroxytamin D: Comparison of three automated assays with liquid chromatography / mass spectrometry (LC-MS).
Poster, SwissMedLab Bern 2012.
Chrysanthi A, Rosella P, Alain R, Nora R, Jonathan M, Daryl T, Felton A, Normanno N, Kurth H, Tops B, Amato E, Mafficini A, Le Corre D, Rachiglio AM, Reiman A, Sheils O, Noppen C, Lacroix L, Cree I, Ligtenberg M, Scarpa A, Puig PL.
A European collaborative translational research study on the development and analysis of a gene hot spot panel using Ion AmpliSeq™ technology and Ion Reporter™ Software.
Ion Torrent User Group Meeting Oct 9-11 2012.
Cottin V, Kottelat D, Fellmann M, Halm S, Rosenthaler E.
Are sperms with tapered head associated with DNA fragmentation?
Poster, European Society of Human Reproduction & Embryology Annual Meeting Istanbul 2012.
Schoeberl UE, Kurth HM, Noto T, Mochizuki K. 
Biased transcription and selective degradation of small RNAs shape the pattern of DNA elimination in Tetrahymena.
Genes Dev 2012 Aug 1;26(15):1729-42.
Lehmann K.
Customer-Relationship-Management (CRM), Grundlegende Haltung oder nichtverstandene Mühen?
Allschwil 2012.
Fenner L, Egger M, Bodmer T, Altpeter E, Zwahlen M, Jaton K, Pfyffer GE, Borrell S, Dubuis O, Bruderer T, Siegrist HH, Furrer H, Calmy A, Fehr J, Stalder JM, Ninet B, Böttger EC, Gagneux S. 
Effect of mutation and genetic background on drug resistance in Mycobacterium tuberculosis.
Antimicrob Agents Chemother 2012 Jun;56(6):3047-53.
Noppen C, Ankelin A, Kurth H, Zettl A, Weintraub J, Egger J-F.
From parameter to panel in molecular pathology.
Clinical Chemistry and Laboratory Medicine 2012;50:A13.
Zuercher E, Butticaz C, Wyniger J, Martinez R, Battegay M, Boffi El Amari E, Dang T, Egger JF, Fehr J, Mueller-Garamvögyi E, Parini A, Schaefer SC, Schoeni-Affolter F, Thurnheer C, Tinguely M, Telenti A, Rothenberger S.
Genetic diversity of EBV-encoded LMP1 in the Swiss HIV Cohort Study and implication for NF-Kb activation.
PLOS One 2012;7(2):e32168.
Ciardo DE, Hermann L, Dubuis O, Burki D, Noppen C, Viollier EH. 
Infectious gastroenteritis: evaluation of two multiplex-PCR assays.
Poster, Joint Annual Meeting, Swiss Society for Infectious Diseases, Swiss Society for Hospital Hygiene, Swiss Society for Microbiology, Swiss Society of Tropical Medicine and Parasitology St. Gallen 2012.
Durovic A.
Inzidenz von C. difficile in der Ambulanz der Nordwestschweiz 2007 - 2011.
BSc in Medicine, Universitätsspital Basel 2012.
Güller U, Zettl A, Worni M, Langer I, Cabalzar-Wondberg D, Viehl C, Demartines N, Zuber M.
Molecular investigation of lymph nodes in colon cancer patients using one-step nucleic acid amplification (OSNA): A new road to better staging?
Cancer 2012.
Schleiffenbaum B.
Monoklonale Gammopathie unklarer Signifikanz (MGUS) und Multiples Myelom.
Praxis 2012;101:1521-31.
Toelle P, Peterli R, Zobel I, Noppen C, Christoffel-Courtin C, Peters T.
Risk factors for secondary hyperparathyroidism after bariatric surgery: a comparison of 4 different operations and of vitamin D-receptor-polymorphism.
Exp Clin Endocrinol Diabetes. 2012;120(10):629-34.
Weber DC, Tille JC, Combescure C, Egger JF, Laouiti M, Hammad K, Granger P, Rubbia-Brandt L, Miralbell R.
The prognostic value of expression of HIF1α, EGFR and VEGF-A, in localized prostate cancer for intermediate- and high-risk patients treated with radiation therapy with or without androgen deprivation therapy.
Radiat Oncol 2012;7:66.



Midasch O, Erlenfeld G, Yueksekdağ N, Fabian D, Burki D, Korall H, Wallner S, Lukačin R.
3-Epi-25-OH-Vitamin D3 in infants.
Poster, Mass Spectrometry Applications to the Clinical Laboratory Annual Meeting San Diego 2011.
Schleiffenbaum B.
AML - Konsolidation und Aufbruch.
Kongressbericht, ASH, 4.-7.12.2010.
Schweizer Zeitschrift für Onkologie 2-2011;41-3.
Noppen C, Ankelin A, Schwager O, Sasse B.
Darmkrebsfrüherkennung: Ergänzung durch den Septin9-Bluttest.
Praxis-Depesche 2011 Jun;7-8.
Plasilova M, Chattopadhyay C, Ghosh A, Wenzel F, Demougin P, Noppen C, Schaub N, Szinnai G, Terracciano L, Heinimann K.
Discordant gene expression signatures and related phenotypic differences in lamin A- and A/C-related Hutchinson-Gilford progeria syndrome (HGPS).
PLoS One. 2011;6(6):e21433.
Babouee B, Widmer AF, Dubuis O, Ciardo D, Droz S, Betsch BY, Garzoni C, Führer U, Battegay M, Frei R, Goldenberger D.
Emergence of four cases of KPC-2 and KPC-3-carrying Klebsiella pneumoniae introduced to Switzerland, 2009 - 10.
Euro Surveill 2011 Mar 17;16(11).
Noppen C.
Gebärmutterhalskrebs-Vorsorge: Mit dem HPV-Test zusätzliche Sicherheit schaffen.
Praxis-Depesche 2011 Dez;16-20.
Serratore MG.
Genotyping of the major human drug metabolizing CYP P450 cytochromes (CYP1A2, CYP2B6, CYP2C9, CYP2C19, CYP2D6, CYP3A4) in healthy male participants of a study to characterize a new low-dose phenotyping cocktail ('Basel' cocktail).
Cottin V, Fabian D, Allemann F, Koller A, Spira JC.
Impact of volatile organic compounds (VOCs) in the in-vitro fertilization (IVF) laboratory.
Poster, European Society of Human Reproduction & Embryology Annual Meeting Stockholm 2011.
Noppen C.
Interview: Darmkrebs-Früherkennung per Blutprobe.
Praxis-Depesche Sonderdruck 2011 Aug;1-3.
Schleiffenbaum B.
Multiples Myelom - Von der Standard- zur risikostratifizierten Therapie.
Kongressbericht, ASH 4.-7.12.2010.
Schweizer Zeitschrift für Onkologie 2-2011;39-41.
Wörner T.
Neukonzeption des Messe- und Kongressauftrittes eines Schweizer Privatlabors.
Schleiffenbaum B, Holzer N, Aeschbach T, Bergerhof A, Casutt M, Faust A, Miozzar H, Neff T, Widler J, Spahn D.
Optimales präoperatives Management der Knie- und Hüftgelenksersatzoperationen unter besonderer Berücksichtigung der Anämie - die Rolle des Hausarztes.
Praxis 2011;100:1071-81.
Bally F.
Planung, Durchführung und Evaluation der neuen MS Office 2010 Suite am Beispiel Viollier AG.
Thoma A, Schleiffenbaum B, Kramers-de Quervain I.
Polymyalgia rheumatica - oder doch polymyalgisches Syndrom?
Swiss Medical Forum 2011;11:948-9.
Fenner L, Malla B, Ninet B, Dubuis O, Stucki D, Borrell S, Huna T, Bodmer T, Egger M, Gagneux S.
"Pseudo-Beijing": evidence for convergent evolution in the direct repeat region of Mycobacterium tuberculosis.
PLOS One 2011;6(9):e24737.
Grujic S.
Vergleich zweier Immunoassays zur Bestimmung von c-ANCA, p-ANCA und Anti-GBM.



Straumann A, Conus S, Grzonka P, Kita H, Kephart G, Bussmann C, Beglinger C, Smith DA, Patel J, Byrne M, Simon HU.
Anti-interleukin-5 antibody treatment (mepolizumab) in active eosinophilic oesophagitis: a randomised, placebo-controlled, double-blind trial.
Gut 2010;59:21-30.
Hofer S, Sasse B, Scheffel H.
Chemotherapy maintenance: an option for prolonged survival in malignant peritoneal mesothelioma.
Acta Oncol 2010;49(1):122-4.
Mustafa A.
D-Dimer Evaluation am CA 1500.
Lang C, Dubuis O, Viollier EH. 
Development and evaluation of automated sample preparation for bacterial identification with MALDI-TOF MS.
Clinical Microbiology and Infection 2010;16:S523.
Chirayath A.
Die Etablierung des N+H+ Virus. Wie kann der Erreger der Schweinegrippe schnell und sicher nachgewiesen werden?
Hofer J.
Empfindlichkeitsüberprüfung der automatisierten Detektion von induzierbaren Clindamycinresistenzen bei Staphylococcus.
Rezaeian F, Wettstein R, Egger JF, Sandmann F, Rücker M, Tobalem M, Vollmar B, Menger MD, Harder Y.
Erythropoietin-induced upregulation of endothelial nitric oxide synthase but not vascular endothelial growth factor prevents musculocutaneous tissue from ischemic damage. 
Lab Invest 2010;90(1):40-51.
Schleiffenbaum B.
Highlights bei MDS und CML: Therapeutisches Neuland wird gesichert.
Kongressbericht, ASH 5.-8.12.2009.
Schweizer Zeitschrift für Onkologie 2-2010;23-5.
Manner J, Radlwimmer B, Hohenberger P, Mössinger K, Küffer S, Sauer C, Belharazem D, Zettl A, Coindre JM, Hallermann C, Hartmann JT, Katenkamp D, Katenkamp K, Schöffski P, Sciot R, Wodzniak A, Lichter P, Marx A, Ströbel P.
MYC high level gene amplification is a distinctive feature of angiosarcomas after irradiation or chronic lymphedema.
Am J Pathol 2010;176:34-9.
Pfister S.
Personalfluktuation innerhalb des ersten Anstellungsjahres bei Viollier.
Zlobec I, Molinari F, Kovac M, Bihl MP, Altermatt HJ, Diebold J, Frick H, Germer M, Horcic M, Montani M, Singer G, Yurtsever H, Zettl A, Terracciano L, Mazzucchelli L, Saletti P, Frattini M, Heinimann K, Lugli A.
Prognostic and predictive value of TOPK stratified by KRAS and BRAF gene alterations in sporadic, hereditary and metastatic colorectal cancer patients.
Br J Cancer 2010;102:151-61.
Noppen C, Sengupta C, Ankelin A, Faninger M, Viollier EH.
Septin 9 on LightCycler 480 - a blood marker for early detection of colorectal cancer: first lab experience.
Clinical Chemistry and Laboratory Medicine 2010;48(5):A5.
Bürgin J.
Vergleich zweier Western-Blot-Methoden zur Bestimmung von IgG gegen Borrelia burgdorferi.



Loubeyre P, Petignat P, Jacob S, Egger JF, Dubuisson JB, Wenger JM. 
Anatomic distribution of posterior deeply infiltrating endometriosis on MRI after vaginal and rectal gel opacification. 
Am J Roentgenol 2009;192(6):1625-31.
Ognanovska E.
Autoantikörper bei primär biliären Zirrhose / autoimuner Cholangitis.
Burki D.
Bluttest zur Früherkennung von Kolonkarzinom.
Synapse 2009;6:10.
Dubuis O, Vital R, Noppen C, Viollier EH.
Comparison of two Matrix-Assisted Laser Desorption Ionisation-Time of Flight Mass Spectrometry (MALDI-TOF MS) systems for rapid identification of bacteria and yeasts in a clinical laboratory.
Poster, 29th Eur Congress Clin Microbiol Infect Dis Helsinki 2009.
Schleiffenbaum B, Fehr J, Favrat B, Krayenbühl PA, Kapanci C, von Orelli F.
Diagnose und Behandlung von Eisenmangel ohne Anämie. 
Praxis 2009;98:1445-51.
Kumar N, Bongiovanni M, Molliet MJ, Egger JF, Pache JC. 
Diverse glandular pathologies coexist with high-grade squamous intraepithelial lesion in cyto-histological review of atypical glandular cells on ThinPrep® specimens.
Cytopathology 2009;20(6):351-8.
Dubuis O, Herrmann L, Viollier EH.
Evaluation of a new chromogenic medium for the culture of human pathogenic campylobacter.
Poster, ASM 68th Annual Asembly Lausanne 2009.
Groeflin N.
Evaluation von RAPID L. Mono Agar für Listeria species in humanen Proben.
Filges I, Röthlisberger B, Noppen C, Boesch N, Wenzel F, Necker J, Binkert F, Huber AR, Heinimann K, Miny P.
Familial 14.5 Mb interstitial deletion 13q21.1-13q21.33: clinical and array-CGH study of a benign phenotype in a three-generation family.
Am J Med Genet A 2009;149A(2):237-41.
Caviezel A, Montet X, Schwartz J, Egger JF, Iselin CE. 
Female hydrocele: the cyst of Nuck. 
Urol Int 2009;82(2):242-5.
Leich E, Salaverria I, Bea S, Zettl A, Wright G, Moreno V, Gascoyne RD, Chan WC, Braziel RM, Rimsza LM, Weisenburger DD, Delabie J, Jaffe ES, Lister A, Fitzgibbon J, Staudt LM, Hartmann EM, Müller-Hermelink HK, Campo E, Ott G, Rosenwald A.
Follicular lymphomas with and without translocation t(14;18) differ in gene expression profiles and genetic alterations.
Blood 2009;114:826-34.
Tille JC, Egger JF, Devillaz MC, Vlastos G, Pelte MF. 
Frozen section inaxillary sentinel lymph nodes for diagnosis of breast cancer micrometastasis.
Anticancer Res 2009;29(11):4711-6.
Vital R.
Identifikation von Bakterien mit Matrix Assisted Laser Desorption Ionisation Time Of Flight Mass Spectrometry (MALDI TOF MS).
Egger JF, Petignat P, Rosset A, Loubeyre P.
Imaging-guidance coaxial multisampling core needle biopsy of suspected advanced ovarian cancer for optimal surgical care. 
Eur J of Radiology Extra 2009;70(2):e87-91.
Maric M.
Interne Kommunikation.
Lucerne University of Applied Sciences and Arts 2009.
Oberndoerfer M, Bucher P, Caviezel A, Platon A, Ott V, Egger JF, Morel P.
Laparoscopic treatment of mucinous urachal adenocarcinoma with mucocele.
Surg Laparosc Endosc Percutan Tech 2009;19(1):e26-8.
Völker HU, Zettl A, Haralambieva E, Blume E, Hagen R, Müller-Hermelink HK, Scheich M.
Leiomyosarcoma of the larynx as a local relapse of squamous cell carcinoma - Report of an unusual case.
Head Neck 2009 May 13 (Epub ahead of print).
Businger A, Zettl A, Sonnet S, Ruszat R, von Flüe M.
Primitve neuroectodermal tumor of the kidney in an adult: a case report.
Cases J 2009;2:679-82.
Baumann JM, Affolter B, Caprez U, Clivaz U, von Arx U.
Role of calcium in the aggregation of particles coated by urinary macromolecules.
Urologia Internationalis 2009;82:459-63.
Kurattli N.
RSV Schnelltest aus einem E-Swab.
Egger JF.
Tumeurs et pseudotumeurs de l'abdomen et du rétropéritoine: Sarcome du stroma endométrial extra-utérin primitif.
Bulletin de l'Académie Internationale de Pathologie Division Française 2009;49:45-9.
Madörin G.
Was macht eine gute Mitarbeiter-Einarbeitung aus? - am Beispiel der Viollier AG.


1978 – 2008

Publikationsangaben aus den Jahren 1978 – 2008 sind auf Anfrage erhältlich.